My microarray journal watch - year 1998 [ this week | 2004 Oct-Dec | 2004 Jul-Sep | 2004 Apr-Jun | 2004 Jan-Mar | 2003 Oct-Dec | 2003 Jul-Sep | 2003 Apr-Jun | 2003 Jan-Mar | 2002 Jul-Dec |  2002 Jan-Jun | 2001 Jul-Dec | 2001 Jan-Jun | 2000 | 1999 | 1998 | 1997 | 1996 & before ]

General
Monitoring cell response, gene expression, clustering and profiling
Genetic analysis
Disease screening and clinical practice
Pharmacogenomics and pharmacogenetics
Other related technical issue; microdissection; linear amplification of RNA (aRNA)
Data analysis
Tissue microarray
Biochip/ lab-on-a-chip/ micro-Total Analysis System (uTAS)		 Can't find the microarray article published in 1998 in my site? 
Try a Google search!
Google

General

  1. Watson A, Mazumder A, Stewart M, Balasubramanian S. Technology for microarray analysis of gene expression. Curr Opin Biotechnol. 1998 Dec;9(6):609-14. Review. [PubMed]
  2. Schena M, Heller RA, Theriault TP, Konrad K, Lachenmeier E, Davis RW. Microarrays: biotechnology's discovery platform for functional genomics. Trends Biotechnol. 1998 Jul;16(7):301-6. Review. [PubMed]

Monitoring cell response, gene expression, clustering and profiling

  1. Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14863-8. [PubMed][pdf][web supplement]
  2. Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B. Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell. 1998 Dec;9(12):3273-97. [PubMed][pdf]
  3. Lutfiyya LL, Iyer VR, DeRisi J, DeVit MJ, Brown PO, Johnston M. Characterization of three related glucose repressors and genes they regulate in  Saccharomyces cerevisiae.  Genetics. 1998 Dec; 150(4): 1377-91. [PubMed]
  4. Alizadeh A, Eisen M, Botstein D, Brown PO, Staudt LM.  Probing lymphocyte biology by genomic-scale gene expression analysis.  J Clin Immunol. 1998 Nov; 18(6): 373-9. Review. [PubMed]
  5. Khan J, Simon R, Bittner M, Chen Y, Leighton SB, Pohida T, Smith PD, Jiang Y, Gooden GC, Trent JM, Meltzer PS.  Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays.  Cancer Res. 1998 Nov 15;58(22):5009-13. [PubMed]
  6. Holstege FC, Jennings EG, Wyrick JJ, Lee TI, Hengartner CJ, Green MR, Golub TR, Lander ES, Young RA.  Dissecting the regulatory circuitry of a eukaryotic genome. Cell. 1998 Nov 25;95(5):717-28. [PubMed][web supplement]
  7. Chu S, DeRisi J, Eisen M, Mulholland J, Botstein D, Brown PO, Herskowitz I. The transcriptional program of sporulation in budding yeast. Science. 1998 Oct 23;282(5389):699-705. [PubMed][pdf][web supplement]
  8. Cho RJ, Fromont-Racine M, Wodicka L, Feierbach B, Stearns T, Legrain P, Lockhart DJ, Davis RW. Parallel analysis of genetic selections using whole genome oligonucleotide arrays. Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3752-7. [PubMed][pdf]
  9. Wen X, Fuhrman S, Michaels GS, Carr DB, Smith S, Barker JL, Somogyi R. Large-scale temporal gene expression mapping of central nervous system development. Proc Natl Acad Sci U S A. 1998 Jan 6;95(1):334-9. [PubMed][pdf]

Genetic analysis

  1. Cho RJ, Fromont-Racine M, Wodicka L, Feierbach B, Stearns T, Legrain P, Lockhart DJ, Davis RW. Parallel analysis of genetic selections using whole genome oligonucleotide arrays. Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3752-7. [PubMed][pdf]

Disease screening and clinical practice

  1. Khan J, Simon R, Bittner M, Chen Y, Leighton SB, Pohida T, Smith PD, Jiang Y, Gooden GC, Trent JM, Meltzer PS.  Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays.  Cancer Res. 1998 Nov 15;58(22):5009-13. [PubMed]

Pharmacogenomics and pharmacogenetics

  1. Braxton S, Bedilion T. The integration of microarray information in the drug development process. Curr Opin Biotechnol. 1998 Dec;9(6):643-9. Review.  [PubMed]
  2. Marton MJ, DeRisi JL, Bennett HA, Iyer VR, Meyer MR, Roberts CJ, Stoughton R, Burchard J, Slade D, Dai H,Bassett DE Jr, Hartwell LH, Brown PO, Friend SH. Drug target validation and identification of secondary drug target effects using DNA microarrays. Nat Med. 1998 Nov;4(11):1293-301. [PubMed]

Other related technical issue; microdissection; linear amplification of RNA (aRNA)

Data analysis

  1. Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14863-8. [PubMed][pdf][web supplement]
  2. Ermolaeva O, Rastogi M, Pruitt KD, Schuler GD, Bittner ML, Chen Y, Simon R, Meltzer P, Trent JM, Boguski MS. Data management and analysis for gene expression arrays. Nat Genet. 1998 Sep;20(1):19-23.
  3. Ben-Dor, A, Yakhini, Z. Clustering Gene Expression Patterns. HP Labs Technical Reports 1998. [abstract][ps][pdf]
  4. Michaels GS, Carr DB, Askenazi M, Fuhrman S, Wen X, Somogyi R. Cluster analysis and data visualization of large-scale gene expression data. Pac Symp Biocomput. 1998;:42-53. [PubMed][pdf]
  5. Liang S, Fuhrman S, Somogyi R. REVEAL, A General Reverse Engineering Algorithm for Inference of GeneticNetwork Architectures. Pac Symp Biocomput. 1998;:18-29. [PubMed][pdf]
  6. Thieffry D, Thomas R. Qualitative analysis of gene networks. Pac Symp Biocomput. 1998;:77-88. [PubMed][pdf]

    7.  

Tissue microarray

  1. Kononen J, Bubendorf L, Kallioniemi A, Barlund M, Schraml P, Leighton S, Torhorst J, Mihatsch MJ, Sauter G, Kallioniemi OP. Tissue microarrays for high-throughput molecular profiling of tumor specimens.  Nat Med. 1998 Jul;4(7):844-7. [PubMed]

Biochip/ lab-on-a-chip/ micro-Total Analysis System (uTAS)

  1. Kopp MU, Mello AJ, Manz A.  Chemical amplification: continuous-flow PCR on a chip.  Science. 1998 May 15;280(5366):1046-8. [PubMed]

last updated: 25 Nov 2001
home